*******************
Benchmark
*******************
We tested MoP on two minION runs using the CRG's HPC where we can run up to 100 jobs in parallel (maximum 8 CPUs each) and using up to 10 GPU cards (GeForce RTX 2080 Ti). The test dataset was published at `ENA `_ with the accession `ERR5296640 `__ for pU samples and `ERR5303454 `__ for Nm samples.
.. list-table:: Dataset
* -
- MOP_PREPROCESS
- MOP_MOD
- MOP_TAIL
- MOP_CONSENSUS
* - Input data
- 95 Gb
- 137 Gb
- 137 Gb
- 14 Mb
* - Execution time
- 10 hours
- 6 hours
- 2.5 hours
- 3 mins
* - Work folder
- 382 Gb
- 595 Gb
- 3 Gb
- 25 Mb
* - Output folder
- 137 Gb
- 14 Mb
- 76 Mb
- 13 Mb