Reference Datasets & Zenodo Repositories
Pre-computed distribution sets, motif lists, model profiles, and consensus sequences trained on 1,019 long-read sequencing samples from the 1000 Genomes Project are publicly available on Zenodo.
Zenodo Releases
| Version | Download Link | Description |
|---|---|---|
| Version 0.5 | Zenodo Dataset v0.5 | Latest distribution catalogues and model parameters. |
| Version 0.2 | Zenodo Dataset v0.2 | Version 0.2 datasets and feature matrices. |
| Version 0.1 | Zenodo Dataset v0.1 | Initial release data tables. |
Data Files Overview
consensus_sequences_complete.fa: FASTA consensus sequences for Alu, LINE-1, and SVA mobile elements.source_loci_LINE1.tsv&source_loci_SVA.tsv: Genomic loci tables for transductions.Separated_Motifs.tsv&SVA_VNTR_Motifs.txt: Motifs for tandem repeat sampling.ERRHMM-ONT-HQ.model: Error model file for Oxford Nanopore read simulation in Module 5.