Welcome to the documentation of Master Of Pores 4

Master of Pores is a pipeline written in Nextflow DSL2 for the analysis of Nanopore data. It can handle reads from direct RNAseq, cDNAseq, DNAseq etc.

The package is currently composed of one pipeline, more will be soon released:

• mop_preprocess: preprocessing of raw data

Contents:

• About Master of Pores 4
• Get Started
• MOP_PREPROCESS
• Resource reporting
• CHANGELOG
• Continuous integration
• Troubleshooting
• TUTORIAL