mRNA-Seq data analysis workflow
- Home
- Course structure
- Linux containers
- Introduction
- mRNA-seq
- Analysis workflow
- Data repositories
- Course data
- Experimental design
- Read QC and trimming
- Read mapping and reference genome
- STAR mapping, BAM/SAM/CRAM and QualiMap
- Genome Browser
- Salmon mapping
- MultiQC report
- R basics
- Differential expression analysis
- Functional analysis
- Small project in groups
- Resources