17.5 Use grep and regular expressions to retrieve columns by their names
Example of a data frame:
# Build data frame
<- data.frame(expression1=1:4,
df_regex expression2=2:5,
expression3=4:7,
annotation=LETTERS[1:4],
expression4=6:3,
average_expression=c(3.25, 3.75, 4.25, 4.75),
stringsAsFactors=FALSE)
# Select column names that start with "expression"
grep(pattern="^expression",
x=colnames(df_regex))
# Select columns from df_regex if their names start with "expression"
grep(pattern="^expression", colnames(df_regex))] df_regex[,